Faculty of Science
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2016

Electron-flux infrared response to varying π-bond topology in charged aromatic monomers. Héctor Álvaro Galué, Jos Oomens, Wybren Jan Buma and Britta Redlich: (2016) Nature Communications, 7, 12633.  [PDF]

Far-Infrared Signatures of Hydrogen Bonding in Phenol Derivatives. D.J. Bakker, A. Peters, V. Yatsyna, V. Zhaunerchyk and M. Rijs Anouk: (2016) J. Phys. Chem. Letters, 7, 1238-1243. [PDF]

Experimental and Theoretical Investigations of Infrared Multiple Photon Dissociation Spectra of Asparagine Complexes with Zn2+ and Cd2+ and Their Deamidation Processes. G. C. Boles, R. A. Coates, G. Berden, J. Oomens and P. B. Armentrout: (2016) J. Phys. Chem.B, 120, 12486-12500.

Spectroscopic evidence for the formation of pentalene(+) in the dissociative ionization of naphthalene. J. Bouwman, A.J. de Haas and J. Oomens: (2016) Chemical Communications, 52, 2636-2638.  [PDF]

The repopulation of electronic states upon vibrational excitation of niobium carbide clusters. V. Chernyy, R. Logemann, J. M. Bakker and A. Kirilyuk: (2016) The Journal of Chemical Physics, 145, 024313.  [PDF]

Determination of the geometric structure of neutral niobium carbide clusters via infrared spectroscopy. V. Chernyy, R. Logemann, J. M. Bakker and A. Kirilyuk: (2016) The Journal of Chemical Physics, 145, 164305.  [PDF]

Zn2+ and Cd2+ cationized serine complexes: infrared multiple photon dissociation spectroscopy and density functional theory investigations. R. A. Coates, G. C. Boles, C. P. McNary, G. Berden, J. Oomens and P. B. Armentrout: (2016) Phys Chem Chem Phys, 18, 22434-22445.  [PDF]

Synthesis and Hydrolysis of Uranyl, Neptunyl, and Plutonyl Gas-Phase Complexes Exhibiting Discrete Actinide–Carbon Bonds. Phuong D. Dau, Daniel Rios, Yu Gong, Maria C. Michelini, Joaquim Marçalo, David K. Shuh, Mejdi Mogannam, Michael J. Van Stipdonk, Theodore A. Corcovilos, Jonathan K. Martens, Giel Berden, Jos Oomens, Britta Redlich and John K. Gibson: (2016) Organometallics, 35, 1228–1240.  [PDF]

Complexes of Ni(ii) and Cu(ii) with small peptides: deciding whether to deprotonate. Robert C. Dunbar, Jonathan Martens, Giel Berden and Jos Oomens: (2016) Physical Chemistry Chemical Physics, 18, 26923-26932.  [PDF]

Erratum: ''High-resolution IR Absorption Spectroscopy of Polycyclic Aromatic Hydrocarbons: The Realm of Anharmonicity'' (2015, ApJ, 814, 23). Maltseva Elena, Petrignani Annemieke, Candian Alessandra, J. Mackie Cameron, Huang Xinchuan, J. Lee Timothy, G. G. M. Tielens Alexander, Oomens Jos and Buma Wybren Jan: (2016) The Astrophysical Journal, 820, 81.  [PDF]

High-resolution IR Absorption Spectroscopy of Polycyclic Aromatic Hydrocarbons in the 3 μm Region: Role of Periphery. Maltseva Elena, Petrignani Annemieke, Candian Alessandra, J. Mackie Cameron, Huang Xinchuan, J. Lee Timothy, G. G. M. Tielens Alexander, Oomens Jos and Buma Wybren Jan: (2016) The Astrophysical Journal, 831, 58. [PDF]

Interaction of Cu+ with cytosine and formation of i-motif-like C-M+-C complexes: alkali versus coinage metals. Juehan Gao, Giel Berden, M. T. Rodgers and Jos Oomens: (2016) Physical Chemistry Chemical Physics, 18, 7269-7277. [PDF]

The Influence of Metal Ion Binding on the IR Spectra of Nitrogen-Containing PAHs. Juehan Gao, Jordy Bouwman, Giel Berden and Jos Oomens: (2016) J. Phys. Chem. A, 120, 7800-7809.  [PDF]

Electronic structure and characterization of a uranyl di-15-crown-5 complex with an unprecedented sandwich structure. Shu-Xian Hu, John K. Gibson, Wan-Lu Li, Michael J. Van Stipdonk, Jonathan Martens, Giel Berden, Britta Redlich, Jos Oomens and Jun Li: (2016) Chemical Communications, 52, 12761-12764.  [PDF]

Deamidation Reactions of Asparagine- and Glutamine-Containing Dipeptides Investigated by Ion Spectroscopy. Lisanne J. M. Kempkes, Jonathan Martens, Josipa Grzetic, Giel Berden and Jos Oomens: (2016) J Am Soc Mass Spectrom, 27, 1855-1869.  [PDF]

Deamidation reactions of protonated asparagine and glutamine investigated by ion spectroscopy. Lisanne J. M. Kempkes, Jonathan K. Martens, Josipa Grzetic, Giel Berden and Jos Oomens: (2016) Rapid Communications in Mass Spectrometry, 30, 483-490.  [PDF]

Water Dissociation upon Adsorption onto Free Iron Clusters Is Size Dependent. Denis M. Kiawi, Valeriy Chernyy, Jos Oomens, Wybren Jan Buma, Zahra Jamshidi, Lucas Visscher, Rens Waters and Joost M. Bakker: (2016) The Journal of Physical Chemistry Letters, 7, 2381–2387. [PDF]

Geometrical Structures of Partially Oxidized Rhodium Cluster Cations, Rh6Om+ (m = 4, 5, 6), Revealed by Infrared Multiple Photon Dissociation Spectroscopy. Kohei Koyama, Toshiaki Nagata, Satoshi Kudoh, Ken Miyajima, Douwe M. M. Huitema, Valeriy Chernyy, Joost M. Bakker and Fumitaka Mafuné: (2016) J. Phys. Chem. A, 120, 8599-8605.  [PDF]

Cluster size and composition dependent water deprotonation by free manganese oxide clusters. Sandra M. Lang, Thorsten M. Bernhardt, Denis M. Kiawi, Joost M. Bakker, Robert N. Barnett and Uzi Landman: (2016) Physical Chemistry Chemical Physics, 18, 15727-15737. [PDF]

Alkali-Metal-Ion-Assisted Hydrogen Atom Transfer in the Homocysteine Radical. Michael Lesslie, Justin Kai-Chi Lau, John T. Lawler, K. W. Michael Siu, Jos Oomens, Giel Berden, Alan C. Hopkinson and Victor Ryzhov: (2016) Chemistry – A European Journal, 22, 2243-2246.  [PDF]

Weak probe readout of coherent impurity orbital superpositions in silicon. K. L. Litvinenko, P. T. Greenland, B. Redlich, C. R. Pidgeon, G. Aeppli and B. N. Murdin: (2016) Physical Review B, 94, 235207. [PDF]

The quadratic Zeeman effect used for state-radius determination in neutral donors and donor bound excitons in Si:P. K. L. Litvinenko, Li Juerong, N. Stavrias, A. J. Meaney, P. C. M. Christianen, H. Engelkamp, K. P. Homewood, C. R. Pidgeon and B. N. Murdin: (2016) Semiconductor Science and Technology, 31, 045007. [PDF]

The anharmonic quartic force field infrared spectra of five non-linear polycyclic aromatic hydrocarbons: Benz[a]anthracene, chrysene, phenanthrene, pyrene, and triphenylene. Cameron J. Mackie, Alessandra Candian, Xinchuan Huang, Elena Maltseva, Annemieke Petrignani, Jos Oomens, Andrew L. Mattioda, Wybren Jan Buma, Timothy J. Lee and Alexander G. G. M. Tielens: (2016) The Journal of Chemical Physics, 145, 084313. [PDF]

Infrared ion spectroscopy in a modified quadrupole ion trap mass spectrometer at the FELIX free electron laser laboratory. Jonathan Martens, Giel Berden, Christoph R. Gebhardt and Jos Oomens: (2016) Review of Scientific Instruments, 87, 103108.  [PDF]

Structures of Fluoranthene Reagent Anions Used in Electron Transfer Dissociation and Proton Transfer Reaction Tandem Mass Spectrometry. Jonathan Martens, Giel Berden and Jos Oomens: (2016) Analytical Chemistry, 88, 6126-6129.  [PDF]

Structural identification of electron transfer dissociation products in mass spectrometry using infrared ion spectroscopy. Jonathan Martens, Josipa Grzetic, Giel Berden and Jos Oomens: (2016) Nature Communications, 7, 11754.  [PDF]

An ultrawide-bandwidth single-sideband modulator for terahertz frequencies. A. S. Meijer, BerdenG, D. D. Arslanov, OzerovM, R. T. Jongma and W. J. van der Zande: (2016) Nature Photonics, 10, 740-744.  [PDF]

IRMPD Spectroscopy of Metalated Flavins: Structure and Bonding of Lumiflavin Complexes with Alkali and Coinage Metal Ions. Pablo Nieto, Alan Günther, Giel Berden, Jos Oomens and Otto Dopfer: (2016) The Journal of Physical Chemistry A, 120, 8297-8308.  [PDF]

Intramolecular proton transfer from one ether oxygen to another. Jos Oomens, Giel Berden, Jonathan Martens and Thomas Hellman Morton: (2016) International Journal of Mass Spectrometry, 418, 188-192.  [PDF]

Dynamics of nonequilibrium electrons on neutral center states of interstitial magnesium donors in silicon. S. G. Pavlov, N. Deßmann, A. Pohl, V. B. Shuman, L. М Portsel, А N. Lodygin, Yu A. Astrov, S. Winnerl, H. Schneider, N. Stavrias, A. F. G. van der Meer, V. V. Tsyplenkov, K. A. Kovalevsky, R. Kh Zhukavin, V. N. Shastin, N. V. Abrosimov and H. W. Hübers: (2016) Phys. rev, B, 94, 8-16.  [PDF]

Breakdown Products of Gaseous Polycyclic Aromatic Hydrocarbons Investigated with Infrared Ion Spectroscopy. A. Petrignani, M. Vala, J. R. Eyler, A. G. G. M. Tielens, G. Berden, A. F. G. van der Meer, B. Redlich and J. Oomens: (2016) The Astrophysical Journal, 1, 8599-8605.  [PDF]

Far- infrared spectra of the tryptamine A conformer by IR-UV ion gain spectroscopy. Michael Schmitt, Frans Spiering, Vitali Zhaunerchyk, Rienk T. Jongma, Sander Jaeqx, Anouk M. Rijs and Wim J. van der Zande: (2016) Phys Chem Chem Phys, 18, 32116-32224 [PDF]

Photoleucine Survives Backbone Cleavage by Electron Transfer Dissociation. A Near-UV Photodissociation and Infrared Multiphoton Dissociation Action Spectroscopy Study. Christopher J. Shaffer, Jonathan Martens, Aleš Marek, Jos Oomens and František Tureček: (2016) Journal of The American Society for Mass Spectrometry, 27, 1176-1185.  [PDF]

Laboratory rotational ground state transitions of NH3D+ and CF+. A. Stoffels, L. Kluge, S. Schlemmer and S. Brünken: (2016) A&A, 593, A56 1-7.  [PDF]

Activation of C–H Bonds in Pt+ + x CH4 Reactions, where x = 1–4: Identification of the Platinum Dimethyl Cation. Oscar W. Wheeler, Michelle Salem, Amanda Gao, Joost M. Bakker and P. B. Armentrout: (2016) J. Phys. Chem. A, 120, 6216-6227. [PDF]

Determination of ground and excited state dipole moments via electronic Stark spectroscopy: 5-methoxyindole. Josefin Wilke, Martin Wilke, W. Leo Meerts and Michael Schmitt: (2016) The Journal of Chemical Physics, 144, 044201. [PDF]

N3 Protonation Induces Base Rotation of 2′-Deoxyadenosine-5′-monophosphate and Adenosine-5′-monophosphate. R. R. Wu, C. C. He, L. A. Hamlow, Y. W. Nei, G. Berden, J. Oomens and M. T.  Rodgers: (2016) J. Phys. Chem.B, 120, 4616-4624.  [PDF]

Protonation induces base rotation of purine nucleotides pdGuo and pGuo. R. R. Wu, C. C. He, L. A. Hamlow, Y. w Nei, G. Berden, J. Oomens and M. T. Rodgers: (2016) Phys Chem Chem Phys, 18, 15081-15090.  [PDF]

2,4-Dihydroxy and O2 Protonated Tautomers of dThd and Thd Coexist in the Gas Phase: Methylation Alters Protonation Preferences versus dUrd and Urd R. R. Wu, Bo Yang, C. E. Frieler, G. Berden, J. Oomens and M. T. Rodgers: (2016) Journal of the American Society for Mass Spectrometry, 27, 410-421.  [PDF]

Far-infrared amide IV-VI spectroscopy of isolated 2- and 4-Methylacetanilide. Vasyl Yatsyna, Daniël J. Bakker, Raimund Feifel, Anouk M. Rijs and Vitali Zhaunerchyk: (2016) The Journal of Chemical Physics, 145, 104309.

Aminophenol isomers unraveled by conformer-specific far-IR action spectroscopy. Vasyl Yatsyna, Daniel J. Bakker, Raimund Feifel, Anouk M. Rijs and Vitali Zhaunerchyk: (2016) Phys Chem Chem Phys, 18, 6275-6283.  [PDF]

Infrared Action Spectroscopy of Low-Temperature Neutral Gas-Phase Molecules of Arbitrary Structure. Vasyl Yatsyna, Daniël J. Bakker, Peter Salén, Raimund Feifel, Anouk M. Rijs and Vitali Zhaunerchyk: (2016) Phys. Rev. Lett., 117, 5-10.  [PDF]

Influence of Sodium Cationization versus Protonation on the Gas-Phase Conformations and Glycosidic Bond Stabilities of 2′-Deoxyadenosine and Adenosine. Y. Zhu, L. A. Hamlow, C. C. He, S. F. Strobehn, J. K. Lee, J. Gao, G. Berden, J. Oomens and M. T. Rodgers: (2016) J. Phys. Chem.B, 120, 8892-8904.  [PDF]

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