2017
Cleaving Off Uranyl Oxygens through Chelation: A Mechanistic Study in the Gas Phase Inorganic Chemistry. Rebecca J. Abergel, Wibe A. de Jong, Gauthier J. P. Deblonde, Phuong D. Dau, Ilya Captain, Teresa M. Eaton, Jiwen Jian, Michael J. van Stipdonk, Jonathan Martens, Giel Berden, Jos Oomens and John K. Gibson: (2017) Inorganic Chemistry, 56, 12930-12937. [PDF]
Isolated complexes of the amino acid arginine with polyether and polyamine macrocycles, the role of proton transfer. Juan Ramon Aviles-Moreno, Giel Berden, Jos Oomens and Bruno Martinez-Haya: (2017) Phys Chem Chem Phys, 19, 31345-31351. [PDF]
Benchmark Ditopic Binding of Cl− and Cs+ by the Macrocycle Hexacyclen. Juan Ramón Avilés-Moreno, Giel Berden, Jos Oomens and Bruno Martínez-Haya: (2017) ChemPhysChem, 18, 1324-1332. [PDF]
Fingerprints of inter- and intramolecular hydrogen bonding in saligenin-water clusters revealed by mid- and far-infrared spectroscopy. Daniel J. Bakker, Arghya Dey, Daniel P. Tabor, Qin Ong, Jerome Mahe, Marie-Pierre Gaigeot, Edwin L. Sibert and Anouk M. Rijs: (2017) Phys Chem Chem Phys, 19, 20343-20356. [PDF]
Anharmonic, dynamic and functional level effects in far-infrared spectroscopy: Phenol derivatives. Daniël J. Bakker, Qin Ong, Arghya Dey, Jérôme Mahé, Marie-Pierre Gaigeot and Anouk M. Rijs: (2017) Journal of Molecular Spectroscopy, 342, 4-16. [PDF]
Hydrogen Liberation from Gaseous 2-Bora-1,3-diazacycloalkanium Cations. Jay-Ar Bendo, Jonathan Martens, Giel Berden, Jos Oomens and Thomas Hellman Morton: (2017) J. Phys. Chem. A, 121, 7910-7916. [PDF]
Experimental and theoretical investigations of infrared multiple photon dissociation spectra of glutamic acid complexes with Zn2+ and Cd2+. Georgia C. Boles, Cameron J. Owen, Giel Berden, Jos Oomens and P. B. Armentrout: (2017) Physical Chemistry Chemical Physics, 19, 12394-12406. [PDF]
Probing the geometry reorganization from solution to gas-phase in putrescine derivatives by IRMPD, 1H-NMR and theoretical calculations. Thiago Carita Correra, Andre Santos Fernandes, Marcelo Mota Reginato, Lucas Colucci Ducati, Giel Berden and Jos Oomens: (2017) Physical Chemistry Chemical Physics, 19, 24330-24340. [PDF]
Coherent superpositions of three states for phosphorous donors in silicon prepared using THz radiation. S. Chick, N. Stavrias, K. Saeedi, B. Redlich, P. T. Greenland, G. Matmon, M. Naftaly, C. R. Pidgeon, G. Aeppli and B. N. Murdin: (2017) Nature Communications, 8, 16038-1 - 16038-9. [PDF]
Products of the Propargyl Self-Reaction at High Temperatures Investigated by IR/UV Ion Dip Spectroscopy. P. Constantinidis, F. Hirsch, I. Fischer, A. Dey and A. M. Rijs: (2017) The Journal of Physical Chemistry A, 121, 181-191. [PDF]
Facile pentagon formation in the dissociation of polyaromatics. Arjen J. de Haas, Jos Oomens and Jordy Bouwman: (2017) Physical Chemistry Chemical Physics, 19, 2974-2980. [PDF]
Revealing Disparate Chemistries of Protactinium and Uranium. Synthesis of the Molecular Uranium Tetroxide Anion, UO4–. Wibe A. de Jong, Phuong D. Dau, Richard E. Wilson, Joaquim Marçalo, Michael J. Van Stipdonk, Theodore A. Corcovilos, Giel Berden, Jonathan Martens, Jos Oomens and John K. Gibson: (2017) Inorganic Chemistry, 56, 3686-3694. [PDF]
Study of the aluminium content in AGB winds using ALMA Indications for the presence of gas-phase (Al2O3)n clusters. L. Decin, A. M. S. Richards, L. B. F. M. Waters, T. Danilovich, D. Gobrecht, T. Khouri, W. Homan, J. M. Bakker, M. Van de Sande, J. A. Nuth and E. De Beck: (2017) A&A, 608, A55 - 1 - 23. [PDF]
Water Microsolvation Can Switch the Binding Mode of Ni(II) with Small Peptides. Robert C. Dunbar, Jonathan Martens, Giel Berden and Jos Oomens: (2017) The Journal of Physical Chemistry Letters, 8, 2634-2638. [PDF]
Magnetoquantum Oscillations at THz Frequencies in InSb. P. Gogoi, D. Kamenskyi, D. D. Arslanov, R. T. Jongma, W. J. van der Zande, B. Redlich, A. F. G. van der Meer, H. Engelkamp, P. C. M. Christianen and J. C. Maan: (2017) Physical Review Letters, 119, 146602-1 -146603-5 [PDF]
Bottom-Up Elucidation of Glycosidic Bond Stereochemistry. Christopher J. Gray, Baptiste Schindler, Lukasz G. Migas, Martina Pičmanová, Abdul R. Allouche, Anthony P. Green, Santanu Mandal, Mohammed S. Motawia, Raquel Sánchez-Pérez, Nanna Bjarnholt, Birger L. Møller, Anouk M. Rijs, Perdita E. Barran, Isabelle Compagnon, Claire E. Eyers and Sabine L. Flitsch: (2017) Analytical Chemistry, 89, 4540-4549. [PDF]
An infrared pump-probe measurement of the Sm3+ 6H7/2 lifetime in LiYF4. Sebastian P. Horvath, Jon-Paul R. Wells, Alexander F. G. van der Meer and Michael F. Reid: (2017) Optical Materials, 66, 8-11. [PDF]
Infrared Spectra of Hexa-peri-hexabenzocoronene Cations: HBC+ and HBC2+. Zhen Junfeng, Castellanos Pablo, Bouwman Jordy, Linnartz Harold and G. G. M. Tielens Alexander: (2017) The Astrophysical Journal, 836, 28. [PDF]
Selective C−H Bond Cleavage in Methane by Small Gold Clusters. Lang Sandra M., Bernhardt Thorsten M., Chernyy Valeriy, Bakker Joost M., Barnett Robert N. and Landman Uzi: (2017) Angewandte Chemie International Edition, 56, 13406-13410. [PDF]
Mapping gas phase dipeptide motions in the far-infrared and terahertz domain. Jerome Mahe, Daniel J. Bakker, Sander Jaeqx, Anouk M. Rijs and Marie-Pierre Gaigeot: (2017) Physical Chemistry Chemical Physics, 19, 13778-13787. [PDF]
A helium nanodroplet setup for mid and far-infrared spectroscopy using pulsed-free-electron lasers: vibrational spectra of propargyl alcohol. Devendra Mani, Theo Fischer, Raffael Schwan, Arghya Dey, Britta Redlich, A. F. G. Van der Meer, Gerhard Schwaab and Martina Havenith: (2017) RSC Advances, 7, 54318-54325. [PDF]
Molecular identification in metabolomics using infrared ion spectroscopy. J. Martens, G. Berden, R. E. van Outersterp, L. A. J. Kluijtmans, U. F. Engelke, C. D. M. van Karnebeek, R. A. Wevers and J. Oomens: (2017) Sci Rep-Uk, 7, 3363-1 - 3363-5. [PDF]
Combined Liquid Chromatography-Infrared Ion Spectroscopy for Identification of Regioisomeric Drug Metabolites. Jonathan Martens, Valerie Koppen, Giel Berden, Filip Cuyckens and Jos Oomens: (2017) Analytical Chemistry, 89, 4359-4362. [PDF]
Gas-phase vibrational spectroscopy of triphenylamine: the effect of charge on structure and spectra. M. U. Munshi, G. Berden, J. Martens and J. Oomens: (2017) Physical Chemistry Chemical Physics, 19, 19881-19889. [PDF]
Preparation of Labile Ni+(cyclam) Cations in the Gas Phase Using Electron-Transfer Reduction through Ion–Ion Recombination in an Ion Trap and Structural Characterization with Vibrational Spectroscopy. Musleh U. Munshi, Stephanie M. Craig, Giel Berden, Jonathan Martens, Andrew F. DeBlase, David J. Foreman, Scott A. McLuckey, Jos Oomens and Mark A. Johnson: (2017) The Journal of Physical Chemistry Letters, 8, 5047-5052. [PDF]
Adsorption Forms of NO on Rhn+ (n = 6–16) Revealed by Infrared Multiple Photon Dissociation Spectroscopy. Toshiaki Nagata, Kohei Koyama, Satoshi Kudoh, Ken Miyajima, Joost M. Bakker and Fumitaka Mafuné: (2017) The Journal of Physical Chemistry C, 121, 27417-27426. [PDF]
Intramolecular proton transfer from one ether oxygen to another. Jos Oomens, Giel Berden, Jonathan Martens and Thomas Hellman Morton: (2017) International Journal of Mass Spectrometry, 418, 188-192. [PDF]
Low-Frequency CH Stretch Vibrations of Free Alkoxide Ions. Jos Oomens, Giel Berden and Thomas Hellman Morton: (2017) Angewandte Chemie, 129, 223-226. [PDF]
A THz spectrometer combining the free electron laser FLARE with 33 T magnetic fields. M. Ozerov, B. Bernáth, D. Kamenskyi, B. Redlich, A. F. G. van der Meer, P. C. M. Christianen, H. Engelkamp and J. C. Maan: (2017) Applied Physics Letters, 110, 094106. [PDF]
Dissociative Ionization and Thermal Decomposition of Cyclopentanone. J. I. M. Pastoors, A. Bodi, P. Hemberger and J. Bouwman: (2017) Chemistry-a European Journal, 23, 13131-13140. [PDF]
Gas-phase complexes of Ni2+ and Ca2+ with deprotonated histidylhistidine (HisHis): A model case for polyhistidyl-metal binding motifs. Katrin Peckelsen, Jonathan Martens, Giel Berden, Jos Oomens, Robert C. Dunbar, Anthony J. H. M. Meijer and Mathias Schäfer: (2017) Journal of Molecular Spectroscopy, 332, 38-44. [PDF]
Ergothioneine and related histidine derivatives in the gas phase: tautomer structures determined by IRMPD spectroscopy and theory. Katrin Peckelsen, Jonathan Martens, Lisa Czympiel, Jos Oomens, Giel Berden, Dirk Grundemann, Anthony J. H. M. Meijer and Mathias Schafer: (2017) Physical Chemistry Chemical Physics, 19, 23362-23372. [PDF]
Corannulene and its complex with water: a tiny cup of water. Cristobal Perez, Amanda L. Steber, Anouk M. Rijs, Berhane Temelso, George C. Shields, Juan Carlos Lopez, Zbigniew Kisiel and Melanie Schnell: (2017) Physical Chemistry Chemical Physics, 19, 14214-14223. [PDF]
High resolution study of the v2 and ν5 rovibrational fundamental bands of thionyl chloride: Interplay of an evolutionary algorithm and a line-by-line analysis. Anthony Roucou, Guillaume Dhont, Arnaud Cuisset, Marie-Aline Martin-Drumel, Sven Thorwirth, Daniele Fontanari and W. Leo Meerts: (2017) The Journal of Chemical Physics, 147, 054303. [PDF]
The significance of the amorphous potential energy landscape for dictating glassy dynamics and driving solid-state crystallisation. Michael T. Ruggiero, Marcin Krynski, Eric Ofosu Kissi, Juraj Sibik, Daniel Markl, Nicholas Y. Tan, Denis Arslanov, Wim van der Zande, Britta Redlich, Timothy M. Korter, Holger Grohganz, Korbinian Lobmann, Thomas Rades, Stephen R. Elliott and J. Axel Zeitler: (2017) Physical Chemistry Chemical Physics, 19, 30039-30047. [PDF]
Hydrogen tunneling above room temperature evidenced by infrared ion spectroscopy. Mathias Schäfer, Katrin Peckelsen, Mathias Paul, Jonathan Martens, Jos Oomens, Giel Berden, Albrecht Berkessel and Anthony J. H. M. Meijer: (2017) Journal of the American Chemical Society, 139, 5779-5786. [PDF]
IRMPD Spectroscopy Sheds New (Infrared) Light on the Sulfate Pattern of Carbohydrates. B. Schindler, L. Barnes, C. J. Gray, S. Chambert, S. L. Flitsch, J. Oomens, R. Daniel, A. R. Allouche and I. Compagnon: (2017) The Journal of Physical Chemistry A, 121, 2114-2120. [PDF]
Excited state dipole moments and transition dipole orientations of different rotamers of 1,2-, 1,3, and 1,4-dimethoxybenzene. Michael Schneider, Martin Wilke, Marie-Luise Hebestreit, Christian Henrichs, Leo Meerts and Michael Schmitt: (2017) ChemPhysChem, 19, 307-318. [PDF]
Rotationally resolved electronic spectroscopy of the rotamers of 1,3-dimethoxybenzene. Michael Schneider, Martin Wilke, Marie-Luise Hebestreit, Jose Arturo Ruiz-Santoyo, Leonardo Alvarez-Valtierra, John T. Yi, W. Leo Meerts, David W. Pratt and Michael Schmitt: (2017) Physical Chemistry Chemical Physics, 19, 21364-21372. [PDF]
Temporal dynamics of the frequency non-degenerate transient photoluminescence enhancement observed following excitation of inter-configurational f→d transitions in CaF2:Yb2+. Pubudu S. Senanayake, Jon-Paul R. Wells, Michael F. Reid, Rosa B. Hughes-Currie, Giel Berden, Roger J. Reeves and Andries Meijerink: (2017) Journal of Luminescence, 192, 608-615. [PDF]
Competition between homogeneous and inhomogeneous broadening of orbital transitions in Si:Bi. N. Stavrias, K. Saeedi, B. Redlich, P. T. Greenland, H. Riemann, N. V. Abrosimov, M. L. W. Thewalt, C. R. Pidgeon and B. N. Murdin: (2017) Physical Review B, 96, 155204. [PDF]
Capturing the Elusive Water Trimer from the Stepwise Growth of Water on the Surface of the Polycyclic Aromatic Hydrocarbon Acenaphthene. Amanda L. Steber, Cristóbal Pérez, Berhane Temelso, George C. Shields, Anouk M. Rijs, Brooks H. Pate, Zbigniew Kisiel and Melanie Schnell: (2017) The Journal of Physical Chemistry Letters, 8, 5744-5750. [PDF]
Structure and Dissociation Pathways of Protonated Tetralin (1,2,3,4-Tetrahydronaphthalene). M. Vala, J. Oomens and G. Berden: (2017) J Phys Chem A, 121, 4606-4612. [PDF]
Structural assignment of small cationic silver clusters by far-infrared spectroscopy and DFT calculations. Johan van der Tol, Dewei Jia, Yejun Li, Valeriy Chernyy, Joost M. Bakker, Minh Tho Nguyen, Peter Lievens and Ewald Janssens: (2017) Physical Chemistry Chemical Physics, 19, 19360-19368. [PDF]
N3 and O2 Protonated Conformers of the Cytosine Mononucleotides Coexist in the Gas Phase. R. R. Wu, L. A. Hamlow, C. C. He, Y. W. Nei, G. Berden, J. Oomens and M. T. Rodgers: (2017) Journal of the American Society for Mass Spectrometry, 28, 1638-1646. [PDF]
The intrinsic basicity of the phosphate backbone exceeds that of uracil and thymine residues: protonation of the phosphate moiety is preferred over the nucleobase for pdThd and pUrd. R. R. Wu, L. A. Hamlow, C. C. He, Y. w Nei, G. Berden, J. Oomens and M. T. Rodgers: (2017) Physical Chemistry Chemical Physics, 19, 30351-30361. [PDF]
Gas-Phase Conformations and N-Glycosidic Bond Stabilities of Sodium Cationized 2′-Deoxyguanosine and Guanosine: Sodium Cations Preferentially Bind to the Guanine Residue. Y. Zhu, L. A. Hamlow, C. C. He, J. K. Lee, J. Gao, G. Berden, J. Oomens and M. T. Rodgers: (2017) The Journal of Physical Chemistry B, 121, 4048-4060. [PDF]
IRMPD Action Spectroscopy, ER-CID Experiments, and Theoretical Studies of Sodium Cationized Thymidine and 5-Methyluridine: Kinetic Trapping During the ESI Desolvation Process Preserves the Solution Structure of [Thd+Na]+. Y. Zhu, H. A. Roy, N. A. Cunningham, S. F. Strobehn, J. Gao, M. U. Munshi, G. Berden, J. Oomens and M. T. Rodgers: (2017) Journal of The American Society for Mass Spectrometry, 28, 2423-2437. [PDF]
Effects of sodium cationization versus protonation on the conformations and N-glycosidic bond stabilities of sodium cationized Urd and dUrd: solution conformation of [Urd+Na]+ is preserved upon ESI. Y. Zhu, H. A. Roy, N. A. Cunningham, S. F. Strobehn, J. Gao, M. U. Munshi, G. Berden, J. Oomens and M. T. Rodgers: (2017) Physical Chemistry Chemical Physics, 19, 17637-17652. [PDF]
Isolated alkali cation complexes of the antibiotic ionophore nonactin: Correlation with crystalline structures. J. R. Aviles-Moreno, F. Gamez, G. Berden, J. Oomens and B. Martinez-Haya: (2017) Phys Chem Chem Phys, 19, 14984-14991.[PDF]
Influence of Transition Metal Cationization versus Sodium Cationization and Protonation on the Gas-Phase Tautomeric Conformations and Stability of Uracil: Application to [Ura+Cu]+ and [Ura+Ag]+. T. E. Akinyemi, R. R. Wu, Y. W. Nei, N. A. Cunningham, H. A. Roy, J. D. Steill, G. Berden, J. Oomens and M. T. Rodgers: (2017) J Am Soc Mass Spectrom, 28, 2438-2453. [PDF]
Thesis 2017
Far infrared spectroscopic methods for molecular beams. Fingerprints of Hydrogen Bond Interactions. D.J. Bakker, 13 November 2017, Radboud University, Nijmegen, Nijmegen te Netherlands, Prof. dr. J. Oomens, dr. A.M. Rijs
Laboratory Spectroscopy of Ionized Polyaromatic Hydrocarbon Derivatives of Astrophysical Interest. J. Gao, 8 June 2017,Radboud University, Nijmegen, Nijmegen te Netherlands, Prof. dr. J. Oomens