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2016

  1. Almeida de NM, Wessels HJ, de Graaf RM, Ferousi C, Jetten MS, Keltjens JT, Kartal B (2016)
    Membrane-bound electron transport systems of an anammox bacterium: A complexome analysis
    Biochim Biophys Acta. 2016 Oct;1857(10):1694-704. doi: 10.1016/j.bbabio.2016.07.006. Epub 2016 Jul 25.
  2. Bhattacharjee AS, Motlagh AM, Jetten MSM, Goel R (2016)
    Methane dependent denitrification-from ecosystem to laboratory-scale enrichment for engineering applications
    Water Research 99, 244-252
  3. Bosch van den, T.J.M., Welte, C.U. (2016)
    Detoxifying symbionts in agriculturally important pest insects
    Microb Biotechnol, in press
  4. Daims H, Lücker S, Wagner et al (2016)
    A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria
    Trends in Microbiology doi:10.1016/j.tim.2016.05.004
  5. Elzen E den, Kox M., Harpenslager S, Hensgens G, Fritz C, Jetten M, Ettwig K, Lamers L
    Symbiosis revisited: phosphorus and acid buffering stimulate N2 fixation but not Sphagnum growth
    The journal for biogeosciences (BG) MS No.: bg-2016-384
  6. Ettwig KF, Zhu B, Speth D, Keltjens JT, Jetten MSM, Kartal B (2016)
    Archaea catalyze iron-dependent anaerobic oxidation of methane
    PNAS Early Edition doi: 10.1073/pnas.1609534113
  7. Ferousi C, Dietl A, Maalcke WJ, Baymann F, Keltjens JT, Jetten MSM, Barends TRM, Kartal B, Reimann J (2016)
    Structural insights into biological hydrazine synthesis
    Biochimica et Biophysica Acta (BBA)-Bioenergetics, 2016/8/31, Vol 1857, e76-e77
  8. Flynn JD, Hisako Hirayama, Yasuyoshi Sakai, Peter F Dunfield, Martin G Klotz, Claudia Knief, Huub JM Op den Camp, Mike SM Jetten, Valentina N Khmelenina, Yuri A Trotsenko, J Colin Murrell, Jeremy D Semrau, Mette M Svenning, Lisa Y Stein, Nikos Kyrpides, Nicole Shapiro, Tanja Woyke, Françoise Bringel, Stéphane Vuilleumier, Alan A DiSpirito, Marina G Kalyuzhnaya (2016)
    Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems
    Genome Announcements 4 (1), e01629-15
  9. Gambelli L, Cremers G, Mesman R, Guerrero S, Dutilh BE, Jetten MSM, Op den Camp HJ, Niftrik L van (2016)
    Ultrastructure and viral metagenome of bacteriophages from an anaerobic methane oxidizing Methylomirabilis bioreactor enrichment culture
    Frontiers in Microbiology (Virology) doi: 10.3389/fmicb.2016.01740
  10. Guo J, Yongzhen Peng, Lu Fan, Liang Zhang, Bing‐Jie Ni, Boran Kartal, Xin Feng, Mike SM Jetten, Zhiguo Yuan (2016)
    Metagenomic analysis of anammox communities in three different microbial aggregates
    Environmental microbiology
  11. Hauck M, Maalcke-Luesken FA, Jetten MSM, Huijbregts MAJ (2016)
    Removing nitrogen from wastewater with side stream anammox: What are the trade-offs between environmental impacts?
    Resources, Conservation and Recycling 107, 212-219
  12. He Z, Cai C, Wang J, Xu X, Zheng P, Jetten MS, Hu B (2016)
    A novel denitrifying methanotroph of the NC10 phylum and its microcolony
    Sci Rep. 2016 Sep 1;6:32241. doi: 10.1038/srep32241
  13. Hemp J, Lücker S, Schott J, Pace LA, Johnson JE, Schink B, Daims H, Fischer WW (2016)
    Genomics of a phototrophic nitrite oxidizer: insights into the evolution of photosynthesis and nitrification
    The ISME Journal advance online publication, 19 April 2016; doi:10.1038/ismej.2016.56
  14. Ho A, Lüke C, Reim A, Frenzel P (2016)
    Resilience of (seed bank) aerobic methanotrophs and methanotrophic activity to desiccation and heat stress.
    Soil Biology and Biochemistry 101:130-138,  doi: 10.1016/j.soilbio.2016.07.015
  15. Hüpeden J, Wegen S, Off S, Lücker S, Bedarf Y, Daims H, Kühn C, Spieck E. (2016)
    Relative Abundance of Nitrotoga spp. in a Biofilter of a Cold-Freshwater Aquaculture Plant Appears To Be Stimulated by Slightly Acidic pH.
    Appl Environ Microbiol. 2016 Jan 8;82(6):1838-45. doi: 10.1128/AEM.03163-15.
  16. Jetten MSM, Martin MO, Römling U, Torres VJ (2016)
    The Endurance of Microbiology
    Trends in Microbiology 24 (5), 319-323
  17. Kartal B, Keltjens JT (2016)
    Anammox Biochemistry: a Tale of Heme c Proteins
    Trends Biochem Sci. 2016 Sep 23. pii: S0968-0004(16)30145-1. doi: 10.1016/j.tibs.2016.08.015. [Epub ahead of print] Review.
  18. Kessel MAHJ, Mesman RJ, Arshad A, Metz JR, Spanings FAT, van Dalen SCM, van Niftrik L, Flik G, Wendelaar Bonga SE, Jetten MSM, Klare PHM, Op Den Camp HJM (2016)
    Branchial nitrogen cycle symbionts relieve ammonium stress in fish
    Environmental Microbiology Reports DOI: 10.1111/1758-2229.12407
  19. Knowles B, Hester ER, et al (2016)
    Lytic to temperate switching of viral communities
    Nature. 2016 Mar 24;531(7595):466-70. doi: 10.1038/nature17193. Epub 2016 Mar 16.
  20. Kox MAR, Lüke C, Fritz C, van den Elzen E, van Alen T, Op Den Camp HJM, Lamers LPM, Jetten MSM, Ettwig K (2016)
    Effects of nitrogen fertilization on diazotrophic activity of microorganisms associated with Sphagnum magellanicum
    Plant Soil DOI 10.1007/s11104-016-2851-z
  21. Lüke C, Speth D, Kox MAR, Villanueva L, Jetten MSM
    Metagenomic analysis of nitrogen and methane cycling in the Arabian Sea oxygen minimum zone
    PeerJ 4:e1924 https://doi.org/10.7717/peerj.1924
  22. Kosten S, Pineiro M, de Goede E, de Klein J, Lamers LP, Ettwig K (2016)
    Fate of methane in aquatic systems dominated by free-floating plants
    Water Res. 2016 Jul 22;104:200-207. doi: 10.1016/j.watres.2016.07.054. [Epub ahead of print]
  23. Maalcke WJ, Reimann J, de Vries S, Butt JN, Dietl A, Kip N, Mersdorf U, et al
    Characterization of anammox hydrazine dehydrogenase, a key N2-producing enzyme in the global nitrogen cycle
    Journal of Biological Chemistry, jbc. M116. 735530
  24. Meyers-Muñoz MA, van der Velde G, van der Meij SET, Stoffels BEMW, van Alen T, Tuti Y, Hoeksema BW (2016)
    The phylogenetic position of a new species of Plakobranchus from West Papua, Indonesia (Mollusca, Opisthobranchia, Sacoglossa)
    ZooKeys 594: 73–98 (2016) doi: 10.3897/zookeys.594.5954 http://zookeys.pensoft.net
  25. Speth DR, in 't Zandt MH, Guerrero Cruz SG, Dutilh BE, Jetten MSM (2016)
    Daan R. Speth, Michiel H. in ’t Zandt, Simon Guerrero-Cruz, Bas E. Dutilh & Mike S.M. Jetten
    Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system
    Nature Communications 31 maart 2016. DOI: 10.1038/ncomms11172.
  26. Stoffels BEMW, van der Meij SET, Hoeksema BW, van Alphen J, van Alen T, Meijers-Muñoz MA, De Voogd NJ, Tuti Y, van der Velde G
    Phylogenetic relationships within the Phyllidiidae (Opisthobranchia, Nudibranchia)
    ZooKeys 605: 1-35 (14 Jul 2016) doi: 10.3897/zookeys.605.7136
  27. Teeseling van MCF, Maresch D, Rath CB, Figl R, Altmann F, Jetten MSM, Messner P, Schäffer C and Niftrik van L (2016)
    The S-layer protein of the anammox bacterium Kuenenia stuttgartiensis is heavily O-glycosylated
    Front. Microbiol.7 (2016) :1721. doi: 10.3389/fmicb.2016.01721
  28. Timmers, P.H.A., Welte, C.U., Koehorst, J.J., Plugge, C.M., Jetten, M.S.M., Stams, A.J.M. (2016)
    Reverse methanogenesis, and respiration in methanotrophic archaea
    Archaea, in press
  29. Vaksmaa A, Lücke C, van Alen T, Vale G, Lupotto E, Jetten MSM,  Ettwig KF (2016)
    Distribution and activity of the anaerobic methanotrophic community in a nitrogen-fertilized Italian paddy soil
    FEMS Microbiology Ecology, 92, 2016, fiw181, 1-11
  30. Vekeman B, Kerckhof FM, Cremers G, de Vos P, Vandamme P, Boon N, Op den Camp HJ, Heylen K (2016)
    New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase
    Environ Microbiol. 2016 Aug 8. doi: 10.1111/1462-2920.13485. [Epub ahead of print]
  31. Vekeman, B., Speth, D., Wille, J., Cremers, G., De Vos, P., Op den Camp, H.J.M. & Heylen, K. (2016)
    Genome characteristics of two novel Type I methanotrophs enriched from North Sea sediments containing exclusively a lanthanide-dependent XoxF5-type methanol dehydrogenase.
    Microb. Ecol. Accepted for publication Ms. No. MECO-D-16-00158
  32. Wang, Y., Huang, P., Ye, F., Jiang, Y., Song, L., Op den Camp, H.J.M., Zhu, G. & Wu, S. (2016)
    Nitrite-dependent anaerobic methane oxidizing bacteria along the water level fluctuation zone of the Three Gorges Reservoir
    Appl. Microbiol. Biotechnol. 100(4): 1977-1986 (doi:10.1007/s00253-015-7083-2)
  33. Weinmaier T, Platzer A, Frank J, Hellinger HJ, Tischler P and Rattei T (2016)
    ConsPred – a rule-based (re-)annotation framework for prokaryotic genomes
    Bioinformatics DOI: 10.1093/bioinformatics/btw393 PMID: 27378292
  34. Welte CU, Rosengarten JF, de Graaf RM, Jetten MSM (2016)
    SaxA-mediated isothiocyanate metabolism in phytopathogenic Pectobacteria.
    Applied and Environmental Microbiology AEM.04054-15
  35. Welte CU, de Graaf R, van den Bosch TJM, Op den Camp HJM, van Dam NM, Jetten MSM (2016)
    Plasmids from the gut microbiome of cabbage root fly larvae encode SaxA that
    catalyses the conversion of the plant toxin 2-phenylethyl isothiocyanate
    Environ. Microbiol. 18(5), 1379-1390 (doi: 10.1111/1462-2920.12997)
  36. Welte CU, Rasigraf O, Vaksmaa A, Versantoort W, Arshad A, Op den Camp HJ, Jetten MSM, Lueke C, Reiman J (2016)
    Nitrate- and nitrite-dependent anaerobic oxidation of methane.
    Environ Microbiol Rep. 2016 Oct 18. doi: 10.1111/1758-2229.12487. [Epub ahead of print]
  37. Welte CU (2016)
    Microbial conversion of coal to natural gas.
    Science 354: 184 (doi: 10.1126/science.aai8101)
  38. Wessel HJCT, de Almeida NM, Kartal B, Keltjens JT
    Bacterial Electron Transfer Chains Primed by Proteomics
    Advances in Microbial Physiology doi:10.1016/bs.ampbs.2016.02.006
  39. Ye F, Wu S, Jiang Y, Op den Camp HJM, Li Z, Zhu G, Zheng J, Wang Y (2016)
    Shifts of archaeal community structure in soil along an elevation gradient in a reservoir water level fluctuation zone
    J. Soils Sediments Online first (13-6-2016) (doi:10.1007/s11368-016-1485-3
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