Recent publications (2018)

  1. Bosch Tijs van den, Tan Kemin , Joachimiak Andrzej , Welte Cornelia
    Functional profiling and crystal structures of isothiocyanatehydrolases found in gut-associated and plant pathogenic bacteria
    Applied and Environmental Microbiology,  2018 May
    doi:10.1128/AEM.00478-18
  2. Camp Op den H. , Mohammadi H.J.M., Pol A. & Dunfield P.F.
    Verrucomicrobial methanotrophs. In: Kalyuzhnaya, M.G. & Xing X-H. (eds.), Methane Biocatalysis: Paving the Way to Sustainability

    Springer International Publishing AG, pp. 43-55 (2018).
  3. Cremers, G., Gambelli, L., van Alen, T.A., van Niftrik L. & Op den Camp, H.J.M.
    Bioreactor virome metagenomics sequencing using DNA spike-ins
    Peer J. 6: e4351  February 2018

    doi:10.7717/peerj.4351
  4. Dalcin Martins P., Danczak R.E., Roux S., Frank J., Borton M.A., Wolfe R.A. Burris M.N. Wilkins M.
    Viral and metabolic controls on high rates of microbial sulfur and carbon cycling in wetland ecosystems
    Microbiome 2018 6:138
    doi.org/10.1186/s40168-018-0522-4
  5. Dean Joshua F. , Jack J. Middelburg, Thomas Röckmann, Rien Aerts, Luke G. Blauw, Matthias Egger, Mike S. M. Jetten, Anniek E. E. de Jong, Ove H. Meisel, Olivia Rasigraf, Caroline P. Slomp, Michiel H. in't Zandt, A. J. Dolman
    Methane feedbacks to the global climate system in a warmer world
    onlinelibrary Wiley.com, 15 February 2018
    doi: 10.1002/2017RG000559
  6. Delmont Tom O., Quince Christopher, Shaiber Alon, Esen Özcan C., Lee Sonny TM, Rappé Michael S., MacLellan Sandra L., Lücker Sebastian & Eren A. MuratNitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
    Nature Microbiology (2018)
    doi.org/10.1038/s41564-018-0176-9
  7. Frank, J., Lücker, S., Vossen, R.H.A.M., Jetten, M.S.M., Hall, R.J., Op den Camp, H.J.M. & Anvar, S.Y. (2018)
    Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single Molecule Real-Time
    Sci. Reports 8: 4580
    doi:10.1038/s41598-018-23053-7
  8. Guerrero-Cruz S., Cremers G., Alen T.A. van, Camp H.J.M. Op den, Jetten S.M., Rasigraf O., Vaksmaa A.
    Response of the anaerobic methanotroph ‘Candidatus Methanoperedens nitroreducens’ to oxygen stress
    Appl. Environ. Microbiol, oktober 2018

    doi: 10.1128/AEM.01832-18
  9. Hackstein, Johannes H. P. (Ed.), Graaf , R.M. de
    Endo symbiotic Methanogenic Archaea
    Microbiology Monographs 19, Springer Nature Switzerland AG 2018
    doi: 10.1007/978-3-319-98836-8_2
  10. Hackstein J.H.P., van Alen T.A. (2018) 
    Methanogens in the Gastrointestinal Tract of Animals
    In: Hackstein J. (eds) (Endo)symbiotic Methanogenic Archaea. (p121-152)
    Microbiology Monographs 19, Springer Nature Switzerland AG 2018
    doi: 10.1007/978-3-319-98836-8_8
  11. Hester E.H.
    How a System of Checks on Symbiosis Could Become Disastrous
    Wiley Online Library, 25 June 2018
    doi.org/10.1002/bies.201800106
  12. Hester E., Harpenslager S.F., Diggelen J.M.H., Lamers, L.L., Jetten M.S.M., Lüke C., Lücker S., Welte C.U.
    Linking Nitrogen Load to the Structure and Function of Wetland Soil and Rhizosphere Microbial Communities
    Msystems, January/February 2018 Volume 3 Issue 1 e00214-17

    doi: 10.1128/mSystems.00214-17
  13. Hogendoorn, C., Roszczenko-Jasińska, P., Martinez-Gomez, N.C., de Graaff, J., Grassl, P., Pol, A., Op den Camp, H.J.M. & Daumann, L. (2018)
    Facile Arsenazo III-based assay for monitoring rare earth element depletion from cultivation media for methanotrophic and methylotrophic bacteria.
    Appl. Environ. Microbiol. On line 7-2-2018

    doi:10.1128/AEM02887-1
  14. Jahn, B., Pol, A., Lumpe, H., Barend, T.R.M., Dietl, A., Hogendoorn, C., Op den Camp, H.J.M. & Daumann, L.J.
    Similar but not the same: First kinetic and structural analysis of a methanol dehydrogenase containing a Europium ion in the active site
    ChemBioChem Online first (10-3-2018)

    doi: 10.1002/cbic.201800130
  15. Jetten Mike S.M.
    Fortune favours the well‐read audience, authors and editors of environmental microbiology
    Environmental Biology, 6 May 2018

    doi.org/10.1111/1462-2920.14127
  16. Jong de A.E.E., Zandt M.H. in 't, Meisel OH., Jetten M.S.M., Dean J.F., Rasigraf O., Welte C.U.
    Increases in temperature and nutrient availability positively affect methane-cycling microorganisms in Arctic thermokarst lake sediments
    Environ Microbiol. 2018 Jul 2.
    doi: 10.1111/1462-2920.14345
  17. Kessel van, M.A.H.J., Stultiens, K., Slegers, M.F.W., Guerrero Cruz, S., Jetten, M.S.M., Kartal, B. & Op den Camp, H.J.M. (2018)
    Current perspectives on the application of N-damo and anammox in wastewater treatment.
    Curr. Opinion Biotechnol. 50: 222–227
    doi.org/10.1016/j.copbio.2018.01.031
  18. Kitzinger, K., H. Koch, S. Lücker, C.J. Sedlacek, C. Herbold, J. Schwarz, A. Daebeler, A.J. Mueller, M. Lukumbuzya, S. Romano, N. Leisch, S.M. Karst, R. Kirkegaard, M. Albertsen, P.H. Nielsen, M. Wagner, and H. Daims* (2018). Characterization of the First “Candidatus Nitrotoga” Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria. mBio 9(4): e01186-18
    doi: 10.1128/mBio.01186-18
  19. Koch, H., M.A.H.J. van Kessel, S. Lücker* (2018).
    Complete nitrification: insights into the ecophysiology of comammox Nitrospira.
    Applied Microbiology and Biotechnology
    doi.org/10.1007/s00253-018-9486-3
  20. Kox Martine A.R., Aalto Sanni L., Penttilä Timo, Ettwig Katharina F., Jetten Mike S.M. and Kessel Maartje A.H.J. van
    The influence of oxygen and methane on nitrogen fixation in subarctic Sphagnum mosses

    AMB Express 2018 8:76

    doi.org/10.1186/s13568-018-0607-2
  21. Lücker S., Lawson, C.
    Complete ammonia oxidation: an important control on nitrification in engineered ecosystems?
    Elsevier, volume 50, April 2018

    doi.org/10.1016/j.copbio.2018.01.015
  22. Lumpe, H., Pol, A., Op den Camp, H.J.M. & Daumann, L.J. (2018). 
    Impact of the Lanthanide contraction on the activity of a Lanthanide-dependent methanol dehydrogenase – A kinetic and DFT study.

    Dalton Transactions, Issue 31, 2018
    doi: 10.1039/C8DT01238E
  23. Peeters SH, van Niftrik L
    Trending topics and open questions in anaerobic ammonium oxidation
    Curr. Opin. Chem. Biol. On line first October 2018
    doi: 10.1016/j.cbpa.2018.09.022
  24. Pflüger Tobias, Camila F. Hernández, Philipp Lewe, Fabian Frank, Haydyn Mertens, Dmitri Svergun, Manfred W. Baumstark, Vladimir Y. Lunin, Jetten, Mike S.M., Susana L. A. Andrade
    Signaling ammonium across membranes through an ammonium sensor histidine kinase

    Nature Communications, volume 9, Article number: 164 (jan 2018)
    doi:10.1038/s41467-017-02637-3
  25. Picone, N., Op den Camp. H.J.M.
    Role of rare earth elements in methanol oxidation
    Current Opinion in Chemical Biology, Volume 49, April 2019
    doi.org/10.1016/j.cbpa.2018.09.019
  26. Pol, A., Renkema, G.H., Tangerman, A., Winkel, E.G., Engelke, U.F., de Brouwer, A.P.M., Lloyd, K.C., Araiza, R.S., van den Heuvel, L., Omran, H., Olbrich, H., Oude Elberink, M., Gillissen, C., Rodenburg, R. J. Sass, J.O., Schwab, O.K., Schäfer, H., Venselaar, H., Sequeira, J.S., Op den Camp, H.J.M. & Wevers, R.A. (2018)
    Mutations in SELENBP1, encoding a novel human methanethiol oxidase, cause extra-oral halitosis
    Nature Genetics volume 50, pages 120–129 (2018)
    doi:10.1038/s41588-017-0006-7
  27. Sakoula, D., Nowka B., Spieck E., Daims H., Lücker S.
    The draft genome sequence of “Nitrospira lenta” strain BS10, a nitrite oxidizing bacterium isolated from activated sludge
    Standards in Genomic Sciences, nov 2018
    doi.org/10.1186/s40793-018-0338-7
  28. Versantvoort, W., Guerrero-Cruz, S., Speth, D.R., Frank, J., Gambelli, L., Cremers, G., van Alen, T., Jetten, M.S.M., Kartal, B., Op den Camp, H.J.M. & Reimann, J. (2018) 
    Comparative genomics of ‘Candidatus Methylomirabilis’ species and description of ‘Ca. Methylomirabilis lanthanidiphila’
    Front. Microbiol. 9: 1672
    doi: 10.3389/fmicb.2018.01672
  29. Welte, C.U. (2018)
    Revival of methane microbiology
    mSystems 3, pii: e00181-17
    doi: 10.1128/mSystems.00181-17
  30. Ye, F., Ma, M., Op den Camp, H.J.M., Chatzinotas, A., Li, L., Lv, M.-Q., Wu, S.-J. & Wang, Y. (2018)
    Different recovery processes of soil ammonia oxidizers from flooding disturbance

    Microb. Ecol. Online first 11-4-2018
    doi: 10.1007/s00248-018-1183-3
  31. Zandt Michiel H in ‘t, Jong Anniek E E de, Slomp Caroline P., Jetten Mike S MThe hunt for the most-wanted chemolithoautotrophic spookmicrobes
    FEMS Microbiology Ecology, fiy064

    doi.org/10.1093/femsec/fiy064
  32. Zandt, Michiel H. in ’t, Tijs J. M. van den Bosch, Rijkers Ruud, Kessel Maartje A.H.J. van, Jetten Mike S.M., Welte, Cornelia U.
    Co-cultivation of the strictly anaerobic methanogen Methanosarcina barkeri with aerobic methanotrophs in an oxygen-limited membrane bioreactor
    Appl Microbiol Biotechnol (2018)

    doi.org/10.1007/s00253-018-9038-x
  33. Zhu Guibing , Shanyun Wang, Yixiao Li, Linjie Zhuang, Siyan Zhao, Cheng Wang, Marcel M.M Kuypers, Mike S.M. Jetten, Yongguan Zhu 
    Microbial Pathways for Nitrogen Loss in an Upland Soil

    Environ Microbiol. 2018 May;20(5):1723-1738.
    doi: 10.1111/1462-2920.14098. Epub 2018 Apr 6. 
  34. Zhanfei He, Jiaqi Wang, Jiajie Hu, Hanqing Yu, Mike S.M.Jetten, Huan Liu, Chaoyang Cai, Yan Liu, Hongxing Ren, Xu Zhang, Miaolian Hua, Xinhua Xu, Ping Zheng, Baolan Hu
    Regulation of coastal methane sinks by a structured gradient of microbial methane oxidizers
    Environmental Pollution, Volume 244, January 2019
    doi.org/10.1016/j.envpol.2018.10.057