NWI-NM103B
Methods in Neuroscience
Course infoSchedule
Course moduleNWI-NM103B
Credits (ECTS)3
CategoryMA (Master)
Language of instructionDutch, English
Offered byRadboud University; Faculty of Science; Wiskunde, Natuur- en Sterrenkunde;
Lecturer(s)
PreviousNext 5
Lecturer
prof. dr. F.P. Battaglia
Other course modules lecturer
Lecturer
B.P. van Gorp
Other course modules lecturer
Lecturer
dr. J.L. Klee
Other course modules lecturer
Examiner
prof. dr. P.H.E. Tiesinga
Other course modules lecturer
Coordinator
prof. dr. P.H.E. Tiesinga
Other course modules lecturer
Academic year2019
Period
KW2  (04/11/2019 to 02/02/2020)
Starting block
KW2
Course mode
full-time
Remarks-
Registration using OSIRISYes
Course open to students from other facultiesYes
Pre-registrationNo
Waiting listNo
Placement procedure-
Aims
  1. Students can describe and compare different high-resolution neurophysiological techniques, and understand the strengths and limitations of the different techniques
  2. Students can motivate why a particular technique will be preferred for a given research question
  3. Students can interpret neural responses to sensory stimuli and behavioural responses obtained with the different techniques
  4. Students understand the physical-chemical principles of electrophsyiological recordings, of two-photon neuroimaging, and of optogenetics.
Content
The course provides conceptual, methodological, and practical insights into the major high-resolution neurophysiological techniques that are used to probe and manipulate the function of local neural circuits in vivo and in vitro preparations, such as single-unit recordings, micro-stimulation, and local inactivation, patch clamping, multi-electrode recording arrays (MEA’s) and multi-unit data analysis (Battaglia), two-photon microscopy (Van Wezel), and optogenetics (Tiesinga).
Each method is explained in a 2 hr lecture, and illustrated by a key research paper, and covered in a two-hour computer practicum, in which experimental results obtained with the method are analysed and interpreted by the students as assignments (and a written report).
Level

Presumed foreknowledge
Neurofysica 1 (WiNSt, Science), or Neurobiofysica (Bi), or equivalent Systems Neuroscience (Master), Behavioural Neuroscience (Master)
Test information
Written exam (70%) and brief essays on results of computer practica (30%)
Specifics
This course is obligatory for all students enrolled in the FNWI Neuroscience Master Track.It is also open as an elective course for students from the Cognitive Neuroscience Research Master (track 4: Brain Networks and Neuronal Communication, and track 2: Perception, Action, and Control).
Additional comments
This course is obligatory for all students enrolled in the FNWI Neuroscience Master Track.It is also open as an elective course for students from the Cognitive Neuroscience Research Master (track 4: Brain Networks and Neuronal Communication, and track 2: Perception, Action, and Control).

Topics
• Single-unit recording of neural activity in the living brain. Electrical microstimulation.
• Analysis of single-unit spike trains from the visual, oculomotor, and auditory systems. Spike-sorting algorithms, reverse correlation, extraction of receptive fields, sensorimotor encoding.
• Multi-electrode array electrophysiology; multi-unit data analysis; cross-correlation;
• Two-photon microscopy; structural two-photon analysis; functional two-photon microscopy
• Optogenetics

Test information
Written exam (70%) and brief essays on results of computer practica (30%)

Prerequisites
Neurofysica 1 (WiNSt, Science), or Neurobiofysica (Bi), or equivalent
Systems Neuroscience (Master), Behavioural Neuroscience (Master)

Required materials
Reader
A syllabus for part of the course will be disseminated through Brightspace.
Articles
A selection of modern research papers will be disseminated through Brightspace.
Book
Guide to Research Techniques in Neuroscience Publisher: Academic Press; 2 edition (6 Mar. 2015)
ISBN:978-0128005118

Instructional modes
Course

Lecture

Response course

Tutorial

Zelfstudie

Tests
Exam
Test weight7
Test typeExam
OpportunitiesBlock KW2, Block KW3

Written assignments
Test weight3
Test typeAssignment
OpportunitiesBlock KW2, Block KW3