ssNake NMR processing and fitting software

logo

ssNake is a cross-platform, open source NMR data processing and analysis program, focused at solid state NMR. Here you can find the latest version of the ssNake software.

Windows Installer: ssNake v1.4 Installer Windows 64bit (zip, 57 MB)
MacOS: Visit the github page below for more information
Python code: ssNake v1.4 python source (zip, 3,3 MB)
Source code repository: https://github.com/smeerten/ssnake/
Advanced tutorials: https://github.com/smeerten/ssnake_tutorials

Publication

S.G.J.van Meerten, W.M.J.Franssen, A.P.M.Kentgens, ssNake: A cross-platform open-source NMR data processing and fitting application, Journal of Magnetic Resonance, Volume 301, 56-66 (2019)
https://doi.org/10.1016/j.jmr.2019.02.006

Change log

[1.4] - 2022-09-25

Added

  • Export to CSV file option
  • Fitting: color boxes added to interface, indicating color per site
  • Bruker fid load now works for up to 8 dimensions
  • Custom x-axis can be restored after an operation cleared this
  • Bruker type data from WSolids can now be loaded
  • Fitting: improved parameter save
  • Dipolar tool: Now also calculates second moments (credits: Henrik Bradtmüller)
  • Fitting: Include separate Lorentz value for satellite transitions (credits: Julien Trébosc)
  • Fitting: Adds average Pq and peak Cq values to the Czjzek Distribution Plot (credits: Henrik Bradtmüller)

Removed

  • Python2 support
  • Qt4 support

Changed

  • Bruker spectra load: better intensity scaling using NC_proc setting
  • MQMAS fitting: Now has chemical shift distribution settings instead of Gauss
  • Colour plot shading set to 'hanning'
  • Diffusion fit: 2 * pi factor added
  • NMR table: update quadrupolar moments to latest values.

Fixed

  • Diagonal projection in 2D plot with a small SW in the indirect dim
  • A bug occurring when switching between 1/2D plots for high dimensional data

[1.3] - 2020-10-15

Added

  • Added warning that PyQt4 and python2 support will be dropped soon
  • Extract part function now has step size
  • Load ASCII now has x-axis unit input
  • Added support for Bruker ParaVision data
  • Fitting window now shows the fit error (RMSD)
  • Relaxation and diffusion fitting now show the equation in the fitting window
  • Baseline correction with sine/cosine functions now possible
  • A multiplot for contour plots has been added
  • Projections in contour plots can now be zoomed by hovering over them and scrolling.
  • Leaving x and y limits empty in save figure will reset those values
  • Added an error message when loading data did not work
  • Added a method to load DMFIT 1D spectrum data
  • 2D Bruker EPR data can now be loaded
  • Plot box can be turned off in save figure

Changed

  • WindowsRun.bat now also checks for pyw installer
  • Double list interface (e.g. combine workspace) how has buttons.
  • New icon for export to ASCII
  • Closing ssNake with no open workspace no longer prompts for confirmation
  • Number of x and y ticks are now minimized

Fixed

  • Fixed an error on loading data in python2
  • Fixed opening some utility windows
  • Error on save figure in fitting window
  • Deleting indices did not accept single integer
  • Fixed a bug on undoing digital filter correction
  • Fitting data with negative spectral widths lead to inverted spectra
  • Fixed a bug in extract part
  • Adding hypercomplex data sets had a bug
  • Fixed a memory leak when working with large 1D data sets

[1.2] - 2019-12-06

Added

  • New plot type: 2D Colour Plot
  • Added experimental support for Bruker ParaVision imaging data
  • File browser tree: added 'open file external' and 'open browser here' option
  • Reference Manual: added 'Roll' and Diffusion fitting
  • Reference Manual: expanded on fitting 'AddData' and 'ConnectPar'
  • Added docstrings to the source code

Changed

  • Minimum required Matplotlib version is now 1.5.0

Fixed

  • Temperature Calibration Tool: crash on start
  • Baseline correction in macro did not work
  • Fixed cos2 apodization (was not squared)

[1.1] - 2019-05-03

Added

  • Tooltips have been added
  • A fixed startup directory for ssNake can be set from preferences
  • Spectra can be aligned based on the maximum position in a given region
  • Added autophasing per trace
  • The traces in a contour plot can now also display the values at the diagonal
  • Added the option for color ranges in array and stacked plots
  • The Czjzek distribution can now be stored in a file
  • Added a fitting routine for mixed CSA and quadrupole data
  • Added a function to roll data
  • Added volume integration from the contour plot
  • Ctrl and Shift can be used as modifiers to change the step size for various buttons
  • Added support of MestreC data
  • Linear prediction using LPSVD

Changed

  • In peak deconvolution, the resonances outside of the spectral windows are now dropped

Fixed

  • Support for Numpy 1.16

[1.0] - 2019-01-21

Added

  • First official version of ssNake

Old versions

v1.3

Windows Installer: ssNake v1.3 Installer Windows 64bit (zip, 49 MB)
Python code: ssNake v1.3 python source (zip, 3,3 MB)

v1.2

Windows Installer: ssNake v1.2 Installer Windows 64bit (zip, 45 MB)
Python code: ssNake v1.2 python source (zip, 3,3 MB)

v1.1

Windows Installer: ssNake v1.1 Installer Windows 64bit (zip, 49 MB)
Python code: ssNake v1.1 python source (zip, 3,6 MB)

v1.0

Windows Installer: ssNake v1.0 Installer Windows 64bit (zip, 52 MB)
Ubuntu/Debian installer: ssNake_1.0_all
Python code: ssNake v1.0 python source (zip, 3,6 MB)

v0.7

Windows Installer: ssNake v0.7 Installer Windows 64bit (zip, 47 MB)
Python code: ssNake v0.7 python source (zip, 2 MB)